This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 118529 | TAGACT-TAGACT-TAGACT-TAGACT-TAGACT | Design primers |
| 145343 | TTGAATGC-TTGAATGC-TTGAATGC | Design primers |
| 149884 | TTTATTCT-TTTATTCT-TTTATTCT-TTTATTCT-TTTATTCT-TTTATTCT-TTTATTCT-TTTATTCT | Design primers |
| 196212 | TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA-TAAATACA | Design primers |
| 255982 | CTTATTTAAT-CTTATTTAAT-CTTATTTAAT-CTTATTTAAT-CTTATTTAAT-CTTATTTAAT | Design primers |
| 442143 | TGATGATTTGAGGGTTAATTA-TGATGATTTGAGGGTTAATTA-TGATGATTTGAGGGTTAATTA-TGATGATTTGAGGGTTAATTA-TGATGATTTGAGGGTTAATTA-TGATGATTTGAGGGTTAATTA-TGATGATTTGAGGGTTAATTA | Design primers |
| 494541 | TGCTTGAA-TGCTTGAA-TGCTTGAA-TGCTTGAA | Design primers |
| 584031 | GTTTTTGATCAGAGA-GTTTTTGATCAGAGA-GTTTTTGATCAGAGA-GTTTTTGATCAGAGA | Design primers |
| 759270 | AAAATACGATGATCTCACAGG-AAAATACGATGATCTCACAGG-AAAATACGATGATCTCACAGG-AAAATACGATGATCTCACAGG-AAAATACGATGATCTCACAGG-AAAATACGATGATCTCACAGG-AAAATACGATGATCTCACAGG-AAAATACGATGATCTCACAGG-AAAATACGATGATCTCACAGG | Design primers |
| 821560 | TATTATTGAGATATT-TATTATTGAGATATT-TATTATTGAGATATT-TATTATTGAGATATT | Design primers |
| 847174 | TGATGATTTGAGGGTTAATTA-TGATGATTTGAGGGTTAATTA-TGATGATTTGAGGGTTAATTA-TGATGATTTGAGGGTTAATTA | Design primers |
| 863318 | TTTCTTTAATCTCTT-TTTCTTTAATCTCTT-TTTCTTTAATCTCTT-TTTCTTTAATCTCTT-TTTCTTTAATCTCTT | Design primers |
| 910616 | CTAGGGATAAAAAAG-CTAGGGATAAAAAAG-CTAGGGATAAAAAAG-CTAGGGATAAAAAAG | Design primers |
| 936522 | TTTAATTCTGTG-TTTAATTCTGTG-TTTAATTCTGTG | Design primers |
| 1184693 | CATCGCCCC-CATCGCCCC-CATCGCCCC | Design primers |
| 1411331 | CAAAAAGATTTGGTTAAAGAA-CAAAAAGATTTGGTTAAAGAA-CAAAAAGATTTGGTTAAAGAA-CAAAAAGATTTGGTTAAAGAA | Design primers |
| 1411416 | AGAAAGATTTGGTTAAAGAAC-AGAAAGATTTGGTTAAAGAAC-AGAAAGATTTGGTTAAAGAAC | Design primers |
| 1412821 | AACAAAAGACAGAACAAGAAA-AACAAAAGACAGAACAAGAAA-AACAAAAGACAGAACAAGAAA | Design primers |
| 1543182 | TTTTAAAGCCTTTCTT-TTTTAAAGCCTTTCTT-TTTTAAAGCCTTTCTT-TTTTAAAGCCTTTCTT-TTTTAAAGCCTTTCTT-TTTTAAAGCCTTTCTT-TTTTAAAGCCTTTCTT-TTTTAAAGCCTTTCTT-TTTTAAAGCCTTTCTT-TTTTAAAGCCTTTCTT-TTTTAAAGCCTTTCTT | Design primers |
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